• Acanthocladium studeri Weltner, 1900 accepted as Lytocarpia angulosa (Lamarck, 1816)
• Acladia africana Marktanner-Turneretscher, 1890 accepted as Halopteris tuba (Kirchenpauer, 1876)
• Actinopluma mirifica Galea, 2020
• Aglaophenia (Lytocarpia) secunda Kirchenpauer, 1872 accepted as Aglaophenia secunda Kirchenpauer, 1872 accepted as Monoserius pennarius (Linnaeus, 1758)
• Aglaophenia (Macrorhynchia) multiplicato-pinnata Kirchenpauer, 1876 accepted as Lytocarpia multiplicatopinnata Stechow, 1919 accepted as Taxella hornelli (Thornely, 1904)
• Aglaophenia (Macrorhynchia) perforata Kirchenpauer, 1876 accepted as Macrorhynchia philippina Kirchenpauer, 1872
• Aglaophenia (Macrorhynchia) philippina Kirchenpauer, 1872 accepted as Macrorhynchia philippina Kirchenpauer, 1872
• Aglaophenia (Macrorhynchia) ramulosa Kirchenpauer, 1872 accepted as Macrorhynchia ramulosa Kirchenpauer, 1872
• Aglaophenia (Macrorhynchia) savignyana Kirchenpauer, 1872 accepted as Macrorhynchia savignyana Kirchenpauer, 1872
• Aglaophenia (Macrorhynchia) urens Kirchenpauer, 1872 accepted as Macrorhynchia philippina Kirchenpauer, 1872
• Aglaophenia acacia Allman, 1883
• Aglaophenia acacia elegans Milstein, 1979 accepted as Aglaophenia acacia Allman, 1883
• Aglaophenia acanthocarpa Allman, 1876
• Aglaophenia adriatica Babic, 1911 accepted as Aglaophenia octodonta (Heller, 1868)
• Aglaophenia allmani Nutting, 1900 accepted as Macrorhynchia allmani (Nutting, 1900)
• Aglaophenia alopecura Kirchenpauer, 1872 (uncertain > taxon inquirendum)
• Aglaophenia amoyensis Hargitt, 1927
• Aglaophenia angulosa Lamouroux, 1816 accepted as Lytocarpia angulosa (Lamarck, 1816)
• Aglaophenia aperta Nutting, 1900 accepted as Aglaophenia lophocarpa Allman, 1877
• Aglaophenia apocarpa Allman, 1877 accepted as Aglaophenia lophocarpa Allman, 1877
• Aglaophenia arborea Verrill, 1874 accepted as Aglaophenia struthionides (Murray, 1860)
• Aglaophenia arcuata Lamouroux, 1816 accepted as Gymnangium arcuatum (Lamouroux, 1816)
• Aglaophenia armata Bale, 1914 accepted as Lytocarpia armata (Bale, 1914)
• Aglaophenia ascidioides Bale, 1882 accepted as Gymnangium ascidioides (Bale, 1882)
• Aglaophenia attenuata Allman, 1883 (uncertain > taxon inquirendum)
• Aglaophenia avicularis Kirchenpauer, 1872 accepted as Halicornopsis elegans (Lamarck, 1816)
• Aglaophenia baggins Soto Àngel & Peña Cantero, 2017
• Aglaophenia bakeri Bale, 1919
• Aglaophenia balei Marktanner-Turneretscher, 1890 accepted as Gymnangium balei (Marktanner-Turneretscher, 1890) accepted as Gymnangium hians (Busk, 1852)
• Aglaophenia bicornuta Nutting, 1900
• Aglaophenia bicuspis G.O. Sars, 1874 accepted as Cladocarpus bicuspis (Sars, 1874)
• Aglaophenia bifida Stechow, 1923 accepted as Lytocarpia flexuosa (Lamouroux, 1816)
• Aglaophenia billardi Bale, 1914
• Aglaophenia bilobidentata Stechow, 1908
• Aglaophenia bispinosa Allman, 1877 accepted as Lytocarpia bispinosa (Allman, 1877)
• Aglaophenia brachiata (Lamarck, 1816)
• Aglaophenia calamus Allman, 1883
• Aglaophenia calycifera Bale, 1914 accepted as Lytocarpia calycifera (Bale, 1914)
• Aglaophenia carinifera Bale, 1914
• Aglaophenia chalarocarpa Allman, 1885 accepted as Aglaophenia pluma (Linnaeus, 1758)
• Aglaophenia coarctata Allman, 1883
• Aglaophenia compressa Bonnevie, 1899 accepted as Cladocarpus bonnevieae Jäderholm, 1909 accepted as Aglaophenopsis bonnevieae (Jäderholm, 1909)
• Aglaophenia constricta Allman, 1877
• Aglaophenia contorta Nutting, 1900 accepted as Lytocarpia contorta (Nutting, 1926) accepted as Lytocarpia tridentata (Versluys, 1899)
• Aglaophenia crenata Fewkes, 1881 accepted as Cladocarpus crenatus (Fewkes, 1881)
• Aglaophenia cristata (Lamarck, 1816) accepted as Aglaophenia pluma (Linnaeus, 1758)
• Aglaophenia cristifrons Nutting, 1900 accepted as Aglaophenia lophocarpa Allman, 1877
• Aglaophenia crucialis Lamouroux, 1816
• Aglaophenia ctenata (Totton, 1930)
• Aglaophenia cupressina Lamouroux, 1816 accepted as Pachyrhynchia cuppressina (Kirchenpauer, 1872)
• Aglaophenia curvidens Fraser, 1937
• Aglaophenia cylindrata Versluys, 1899 accepted as Aglaophenia rhynchocarpa Allman, 1877
• Aglaophenia cystifera Bale, 1915
• Aglaophenia dannevigi Bale, 1914
• Aglaophenia decumbens Bale, 1914
• Aglaophenia delicatula (Busk, 1852) accepted as Lytocarpia delicatula (Busk, 1852)
• Aglaophenia dichotoma Kirchenpauer, 1872 (accepted > unreplaced junior homonym)
• Aglaophenia diegensis Torrey, 1904
• Aglaophenia difficilis Vervoort & Watson, 2003
• Aglaophenia digitulus Vervoort & Watson, 2003
• Aglaophenia disjuncta Pictet, 1893 accepted as Macrorhynchia disjuncta (Pictet, 1893)
• Aglaophenia dispar Fraser, 1948
• Aglaophenia distans Allman, 1877 accepted as Lytocarpia distans (Allman, 1877)
• Aglaophenia divaricata (Busk, 1852)
• Aglaophenia divaricata cystifera Bale, 1915 accepted as Aglaophenia cystifera Bale, 1915
• Aglaophenia diversidentata Fraser, 1948
• Aglaophenia dubia Nutting, 1900
• Aglaophenia elegans Lamouroux, 1816 (uncertain > taxon inquirendum)
• Aglaophenia elegans Nutting, 1900 accepted as Aglaophenia lophocarpa Allman, 1877
• Aglaophenia elongata Meneghini, 1845
• Aglaophenia epizoica Fraser, 1948
• Aglaophenia filicula Allman, 1883 accepted as Aglaophenia tubulifera (Hincks, 1861)
• Aglaophenia flexuosa Lamouroux, 1816 accepted as Lytocarpia flexuosa (Lamouroux, 1816)
• Aglaophenia flowersi Nutting, 1900 accepted as Aglaophenia dubia Nutting, 1900
• Aglaophenia fluxa Fraser, 1948
• Aglaophenia folini Marion, 1906 accepted as Cladocarpus sigma (Allman, 1877)
• Aglaophenia folinii Milne-Edwards, 1881 accepted as Cladocarpus sigma (Allman, 1877)
• Aglaophenia fusca Kirchenpauer, 1872 accepted as Macrorhynchia filamentosa (Lamarck, 1816)
• Aglaophenia Gaimardi Lamouroux, 1824 accepted as Plumularia gaimardi (Lamouroux, 1824)
• Aglaophenia galatheae Kramp, 1956
• Aglaophenia glutinosa Lamouroux, 1816 accepted as Halopteris glutinosa (Lamouroux, 1816)
• Aglaophenia gracilis Allman, 1877 accepted as Aglaophenia dubia Nutting, 1900
• Aglaophenia gracilis Lamouroux, 1816 (uncertain > taxon inquirendum)
• Aglaophenia gracillima Fewkes, 1881 accepted as Aglaophenia rhynchocarpa Allman, 1877
• Aglaophenia harpago Schenck, 1965
• Aglaophenia helleri Marktanner-Turneretscher, 1890 accepted as Aglaophenia octodonta (Heller, 1868)
• Aglaophenia holubi Leloup, 1934
• Aglaophenia howensis Briggs, 1918 accepted as Lytocarpia howensis (Briggs, 1918)
• Aglaophenia huttoni Kirchenpauer, 1876 accepted as Gymnangium longirostre (Kirchenpauer, 1872)
• Aglaophenia hystrix Vervoort & Watson, 2003
• Aglaophenia ijimai Stechow, 1908 accepted as Aglaophenia suensonii Jäderholm, 1896
• Aglaophenia ilicistoma Bale, 1882 accepted as Gymnangium ilicistomum (Bale, 1882)
• Aglaophenia inconspicua Torrey, 1902
• Aglaophenia inconstans Fraser, 1941 (uncertain > taxon inquirendum)
• Aglaophenia indica Stechow, 1921
• Aglaophenia insignis Fewkes, 1881
• Aglaophenia insolens Fraser, 1943 accepted as Aglaophenia rhynchocarpa Allman, 1877
• Aglaophenia integra G.O. Sars, 1874 accepted as Cladocarpus integer (Sars, 1873)
• Aglaophenia integriseptata Fraser, 1948
• Aglaophenia kirchenpaueri (Heller, 1868)