1. Species Apogonichthys infuscus (Fourmanoir, 1955)
2. Species Apogonichthys landoni Herre, 1934
3. Species Apogonichthys ocellatus (Weber, 1913)
4. Species Apogonichthys perdix Bleeker, 1854
5. Species Apogonichthys ahimsa Whitley, 1959 accepted as Apogonichthyoides chrysurus (Ogilby, 1889)
6. Species Apogonichthys albomarginatus (Smith & Radcliffe, 1912) accepted as Jaydia albomarginatus (Smith & Radcliffe, 1912)
7. Species Apogonichthys auritus (Valenciennes, 1831) accepted as Fowleria aurita (Valenciennes, 1831)
8. Species Apogonichthys brachygrammus (Jenkins, 1903) accepted as Foa brachygramma (Jenkins, 1903)
9. Species Apogonichthys carinatus (Cuvier, 1828) accepted as Jaydia carinatus (Cuvier, 1828)
10. Species Apogonichthys coggeri Whitley, 1964 accepted as Neamia octospina Smith & Radcliffe, 1912
11. Species Apogonichthys darnleyensis Alleyne & MacLeay, 1877 accepted as Apogonichthyoides timorensis (Bleeker, 1854)
12. Species Apogonichthys ellioti (Day, 1875) accepted as Jaydia ellioti (Day, 1875)
13. Species Apogonichthys fo (Jordan & Seale, 1905) accepted as Foa fo Jordan & Seale, 1905
14. Species Apogonichthys glaga (Bleeker, 1849) accepted as Jaydia poeciloptera (Cuvier, 1828)
15. Species Apogonichthys gracilis Bleeker, 1856 accepted as Rhabdamia gracilis (Bleeker, 1856)
16. Species Apogonichthys hyalinus (Smith & Radcliffe, 1912) accepted as Foa hyalina (Smith & Radcliffe, 1912)
17. Species Apogonichthys isostigma Jordan & Seale, 1906 accepted as Fowleria isostigma (Jordan & Seale, 1906)
18. Species Apogonichthys lineatus (Temminck & Schlegel, 1843) accepted as Jaydia lineata (Temminck & Schlegel, 1843) (unaccepted > superseded combination)
19. Species Apogonichthys macrophthalmus Bleeker, 1860 accepted as Ostorhinchus compressus (Smith & Radcliffe, 1911) (synonym)
20. Species Apogonichthys marmoratus Alleyne & MacLeay, 1877 accepted as Fowleria marmorata (Alleyne & MacLeay, 1877)
21. Species Apogonichthys melanopterus Fowler & Bean, 1930 accepted as Ostorhinchus melanopterus (Fowler & Bean, 1930)
22. Species Apogonichthys mentalis Evermann & Seale, 1907 accepted as Rhabdamia mentalis (Evermann & Seale, 1907)
23. Species Apogonichthys nafae Smyder, 1909 accepted as Fowleria variegata (Valenciennes, 1832) (junior synonym)
24. Species Apogonichthys nigripinnis (Cuvier, 1828) accepted as Apogonichthyoides nigripinnis (Cuvier, 1828) (misspelling)
25. Species Apogonichthys nudus Regan, 1905 accepted as Rhabdamia nuda (Regan, 1905)
26. Species Apogonichthys poecilopterus (Cuvier, 1828) accepted as Jaydia poeciloptera (Cuvier, 1828)
27. Species Apogonichthys polystigma Bleeker, 1854 accepted as Fowleria variegata (Valenciennes, 1832)
28. Species Apogonichthys puncticulatus Poey, 1867 accepted as Astrapogon puncticulatus (Poey, 1867)
29. Species Apogonichthys queketti (Gilchrist, 1903) accepted as Jaydia queketti (Gilchrist, 1903)
30. Species Apogonichthys stellatus Cope, 1867 accepted as Astrapogon stellatus (Cope, 1867)
31. Species Apogonichthys striatus (Smith & Radcliffe, 1912) accepted as Jaydia striata (Smith & Radcliffe, 1912)
32. Species Apogonichthys taeniopterus Bleeker, 1860 accepted as Jaydia truncata (Bleeker, 1855) (synonym)
33. Species Apogonichthys uninotatus (Smith & Radcliffe, 1912) accepted as Apogonichthyoides uninotatus (Smith & Radcliffe, 1912)
34. Species Apogonichthys variegatus (Valenciennes, 1832) accepted as Fowleria variegata (Valenciennes, 1832)
35. Species Apogonichthys waikiki Jordan & Evermann, 1903 accepted as Apogonichthys perdix Bleeker, 1854
36. Species Apogonichthys zuluensis Fowler, 1934 accepted as Foa brachygramma (Jenkins, 1903)

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