• Pontogeneia Boeck, 1871
• Pontogeneia Kohlm., 1975
• Pontogeneia andrijashevi Gurjanova, 1951
• Pontogeneia antarctica Chevreux, 1906 accepted as Gondogeneia antarctica (Chevreux, 1906)
• Pontogeneia arenaria Bulyčeva, 1952
• Pontogeneia barnardi Rabindranath, 1972 accepted as Abdia latipalpus (Walker & Scott, 1903)
• Pontogeneia bartschi Shoemaker, 1948
• Pontogeneia bidentata Stephensen, 1927 accepted as Gondogeneia bidentata (Stephensen, 1927)
• Pontogeneia brevirostrata Bulyčeva, 1952 accepted as Paramoera brevirostrata (Bulyčeva, 1952)
• Pontogeneia calospora (Pat.) Kohlm., 1975
• Pontogeneia capensis (Dana, 1853) accepted as Paramoera capensis (Dana, 1853)
• Pontogeneia chosroides Nicholls, 1938 accepted as Gondogeneia chosroides (Nicholls, 1938)
• Pontogeneia cnormis (Pat. & Hariot) Kohlm.
• Pontogeneia codiicola (Dowson) Kohlm. & E. Kohlm., 1979
• Pontogeneia cubensis (Har. & Pat.) Kohlmeyer, 1975
• Pontogeneia danai (Thomson, 1879) accepted as Gondogeneia danai (Thomson, 1879)
• Pontogeneia denticulata Nicholls, 1938 accepted as Gondogeneia denticulata (Nicholls, 1938) accepted as Gondogeneia chosroides (Nicholls, 1938)
• Pontogeneia enormis (Pat. & Har.) Kohlm., 1975
• Pontogeneia erikae Kohlm., 1981
• Pontogeneia georgiana (Pfeffer, 1888) accepted as Gondogeneia georgiana (Pfeffer, 1888)
• Pontogeneia gracilicauda Schellenberg, 1931 accepted as Gondogeneia gracilicauda (Schellenberg, 1931)
• Pontogeneia inermis (Krøyer, 1838)
• Pontogeneia intermedia Gurjanova, 1938
• Pontogeneia ivanovi Gurjanova, 1951
• Pontogeneia kondakovi Gurjanova, 1951
• Pontogeneia litoralis Oldevig, 1959 accepted as Paramoera litoralis (Oldevig, 1959)
• Pontogeneia littorea Ren, 1992
• Pontogeneia longleyi Shoemaker, 1933 accepted as Tethygeneia longleyi (Shoemaker, 1933)
• Pontogeneia macrodon Schellenberg, 1931 accepted as Gondogeneia macrodon (Schellenberg, 1931)
• Pontogeneia magellanica (Stebbing, 1888) accepted as Atyloella magellanica (Stebbing, 1888)
• Pontogeneia magellanica (Stebbing, 1888) sensu Chevreux, 1906 accepted as Paramoera edouardi Schellenberg, 1929
• Pontogeneia makarovi Gurjanova, 1951 accepted as Tethygeneia makarovi (Gurjanova, 1951)
• Pontogeneia melanophthalma Gurjanova, 1938
• Pontogeneia microdictyi Kohlm. & Volkm.-Kohlm., 2009
• Pontogeneia minuta Chevreux, 1908 accepted as Tethygeneia minuta (Chevreux, 1908)
• Pontogeneia mokyevskii Gurjanova, 1952 accepted as Paramoera mokyevskii (Gurjanova, 1952)
• Pontogeneia nasa J.L Barnard, 1969 accepted as Nasageneia nasa (J.L. Barnard, 1969)
• Pontogeneia oligoseta Ren, 2012
• Pontogeneia opata J.L. Barnard, 1979 accepted as Tethygeneia opata (J.L. Barnard, 1979)
• Pontogeneia pacifica Schellenberg, 1938 accepted as Tethygeneia pacifica (Schellenberg, 1938)
• Pontogeneia padinae Kohlm., 1975
• Pontogeneia quinsana J.L. Barnard, 1964 accepted as Nasageneia quinsana (J.L. Barnard, 1964)
• Pontogeneia redfearni Thurston, 1974 accepted as Gondogeneia redfearni (Thurston, 1974)
• Pontogeneia rostrata Gurjanova, 1938
• Pontogeneia simplex (Dana, 1852) accepted as Gondogeneia simplex (Dana, 1852)
• Pontogeneia stocki Hirayama, 1990
• Pontogeneia subantarctica Stephensen, 1938 accepted as Gondogeneia subantarctica (Stephensen, 1938)
• Pontogeneia tasmaniae (Thomson, 1893) accepted as Gondogeneia tasmaniae (Thomson, 1893)
• Pontogeneia tricuspidata Gurjanova, 1938 accepted as Accedomoera tricuspidata (Gurjanova, 1938)
• Pontogeneia tristanensis K.H. Barnard, 1932 accepted as Gondogeneia tristanensis (K.H. Barnard, 1932)
• Pontogeneia ushuaiae Schellenberg, 1931 accepted as Gondogeneia ushuaiae (Schellenberg, 1931)
• Pontogeneia valoniopsidis (Cribb & J.W. Cribb) Kohlm., 1975
• Pontogeneia verrilli Kunkel, 1910 accepted as Eusiroides verrilli (Kunkel, 1910) accepted as Eusiroides monoculoides (Haswell, 1879)