• Jouannetia Des Moulins, 1828
• Jouannetia (Jouannetia) Des Moulins, 1828 represented as Jouannetia Des Moulins, 1828
• Jouannetia (Jouannetia) duchassaingi P. Fischer, 1862 represented as Jouannetia duchassaingi P. Fischer, 1862
• Jouannetia (Pholadopsis) Conrad, 1849 represented as Jouannetia Des Moulins, 1828
• Jouannetia (Pholadopsis) dutemplei (Deshayes, 1856) † accepted as Jouannetia dutemplei (Deshayes, 1856) †
• Jouannetia (Pholadopsis) morleti Cossmann, 1886 † accepted as Jouannetia morleti Cossmann, 1886 †
• Jouannetia (Pholadopsis) pectinata (Conrad, 1849) represented as Jouannetia pectinata (Conrad, 1849)
• Jouannetia (Pholadopsis) thelussoniae de Raincourt & Munier-Chalmas, 1863 † accepted as Jouannetia thelussoniae de Raincourt & Munier-Chalmas, 1863 †
• Jouannetia (Pholadopsis) uncinata Cosel, 1995 represented as Jouannetia uncinata Cosel, 1995
• Jouannetia (Pholadopsis) vignoni P. Fischer, 1862 represented as Jouannetia vignoni P. Fischer, 1862
• Jouannetia cumingii (G. B. Sowerby II, 1849)
• Jouannetia cuneata Tate, 1887 †
• Jouannetia duchassaingi P. Fischer, 1862
• Jouannetia dutemplei (Deshayes, 1856) †
• Jouannetia globulosa (Quoy & Gaimard, 1835)
• Jouannetia japonica Yokoyama, 1920 accepted as Netastoma japonicum (Yokoyama, 1920)
• Jouannetia kamakurensis Yokoyama, 1922 accepted as Penitella gabbii (Tryon, 1863)
• Jouannetia morleti Cossmann, 1886 †
• Jouannetia pectinata (Conrad, 1849)
• Jouannetia quillingi R. D. Turner, 1955
• Jouannetia semicaudata Des Moulins, 1828
• Jouannetia spinosa Haga & Kase, 2008
• Jouannetia thelussoniae de Raincourt & Munier-Chalmas, 1863 †
• Jouannetia uncinata Cosel, 1995
• Jouannetia vignoni P. Fischer, 1862
• Jouannetia yabei Yokoyama, 1924 † accepted as Penitella gabbii (Tryon, 1863)