• Eudoxia Eschscholtz, 1825 accepted as Diphyes Cuvier, 1817
• Eudoxia alata McCrady, 1857 accepted as Chelophyes appendiculata (Eschscholtz, 1829)
• Eudoxia arctica Chun, 1897 accepted as Dimophyes arctica (Chun, 1897)
• Eudoxia bojani Eschscholtz, 1825 accepted as Diphyes bojani (Eschscholtz, 1825)
• Eudoxia campanula Leuckart, 1853 accepted as Chelophyes appendiculata (Eschscholtz, 1829)
• Eudoxia campanulata Fewkes, 1880 (unaccepted > nomen nudum)
• Eudoxia cuboides Leuckart, 1853 accepted as Abylopsis tetragona (Otto, 1823)
• Eudoxia dohrni Gamulin, 1966 (uncertain > taxon inquirendum)
• Eudoxia eschscholtzi Busch, 1851 accepted as Eudoxia eschscholzii Busch, 1851 accepted as Muggiaea kochii (Will, 1844)
• Eudoxia eschscholzii Busch, 1851 accepted as Muggiaea kochii (Will, 1844)
• Eudoxia galathea Moser, 1925 (uncertain > taxon inquirendum)
• Eudoxia lessonii Eschscholtz, 1829 accepted as Diphyes dispar Chamisso & Eysenhardt, 1821
• Eudoxia macra Totton, 1954 accepted as Lensia cossack Totton, 1941
• Eudoxia messanensis Gegenbaur, 1854 accepted as Chelophyes appendiculata (Eschscholtz, 1829)
• Eudoxia prismatica Gegenbaur, 1859 accepted as Abylopsis eschscholtzii (Huxley, 1859)
• Eudoxia problematica (Moser, 1925) accepted as Chuniphyes problematica Moser, 1925
• Eudoxia pyramis Eschscholtz, 1829 accepted as Abylopsis tetragona (Otto, 1823)
• Eudoxia rigida Schneider, 1898 (uncertain > nomen dubium)
• Eudoxia russelli Totton, 1932 accepted as Chelophyes appendiculata (Eschscholtz, 1829)
• Eudoxia serrata Chun, 1888 accepted as Diphyes serrata Chun, 1888 accepted as Diphyes bojani (Eschscholtz, 1825)
• Eudoxia tenuis Patriti, 1965 accepted as Lensia multicristata (Moser, 1925)
• Eudoxia tottoni Leloup, 1934 accepted as Amphicaryon Chun, 1888
• Eudoxia triangularis Eschscholtz, 1829 (uncertain > taxon inquirendum)
• Eudoxia trigonae Gegenbaur, 1859 accepted as Abyla trigona Quoy & Gaimard, 1827
• Eudoxia vasconiensis Patriti, 1965 accepted as Lensia fowleri (Bigelow, 1911)
• Eudoxiaotopoplanini Winsor, 2009
• Eudoxiatopoplana Winsor, 2009
• Eudoxiatopoplana bilaticlavia Winsor, 2009
• Eudoxiatopoplaninae Winsor, 2009 accepted as Eudoxiaotopoplanini Winsor, 2009