• Amphiprora C.G. Ehrenberg, 1843
• Amphiprora aboensis Cleve-Euler, 1915 (uncertain > unassessed)
• Amphiprora aculeata Krasske, 1941
• Amphiprora acuta M.Peragallo (uncertain > unassessed)
• Amphiprora acuta var. acuta M. Peragallo, 1924 (uncertain > unassessed)
• Amphiprora acuta var. minor M. Peragallo, 1924 (uncertain > unassessed)
• Amphiprora acuta var. neogena Pantocsek, 1892 (uncertain > unassessed)
• Amphiprora aequatorialis (Cleve) De Toni, 1873 accepted as Amphicampa aequatorialis Cleve, 1873
• Amphiprora alata (Ehrenberg) Kützing, 1844 accepted as Entomoneis alata (Ehrenberg) Ehrenberg, 1845
• Amphiprora alata f. alata (Ehrenberg) Kützing, 1844 accepted as Navicula alata Ehrenberg, 1840 accepted as Entomoneis alata (Ehrenberg) Ehrenberg, 1845
• Amphiprora alata f. minor Tempère & Peragallo, 1910 (uncertain > unassessed)
• Amphiprora alata var. angustior ‘McCall' according to Mills, 1933 (uncertain > unassessed)
• Amphiprora alata var. genuina Cleve-Euler, 1952 (uncertain > unassessed)
• Amphiprora alata var. holdereri (Gutwinski) Playfair, 1914 (1915) accepted as Amphiprora paludosa var. holdereri R.Gutwinski
• Amphiprora alata var. intermedia Cleve, 1894 (uncertain > unassessed)
• Amphiprora alata var. japonica Cleve, 1894 (uncertain > unassessed)
• Amphiprora alata var. maeotica Proschkina-Lavrenko, 1960 (uncertain > unassessed)
• Amphiprora alata var. pontica Mereschkowsky, 1902 (uncertain > unassessed)
• Amphiprora alata var. pulchra (Bailey) Cleve, 1894 accepted as Amphiprora pulchra Bailey, 1851 accepted as Entomoneis pulchra (Bailey) Reimer, 1975
• Amphiprora amphoroides Østrup, 1895 (uncertain > unassessed)
• Amphiprora angustata Hendey, 1964 (uncertain > unassessed)
• Amphiprora antarctica Grunow in Cleve & Möller, 1878 (uncertain > unassessed)
• Amphiprora approximata (Cleve) De Wildeman, 1899 accepted as Tropidoneis approximata Cleve, 1894
• Amphiprora arenaria Brébisson in Rabenhorst, 1870 (uncertain > unassessed)
• Amphiprora australis Petit, 1908 (uncertain > unassessed)
• Amphiprora balearica (Grunow in Cleve & Grunow) M. Peragallo, 1897 accepted as Amphiprora sulcata var. balearica Grunow in Cleve & Grunow, 1880
• Amphiprora balearica Cleve & Grunow in Cleve & Möller, 1878 (uncertain > unassessed)
• Amphiprora baltica (Pfitzer) Petit, 1877 accepted as Plagiotropis baltica var. baltica Pfitzer, 1871
• Amphiprora belgicae Van Heurck, 1909 accepted as Banquisia belgicae (Van Heurck) Paddock, 1988 accepted as Amphiprora belgicae var. belgicae Van Heurck, 1909
• Amphiprora belgicae var. belgicae Van Heurck, 1909 (uncertain > unassessed)
• Amphiprora belgicae var. major Van Heurck, 1909 (uncertain > unassessed)
• Amphiprora biharensis Pantocsek, 1892 (uncertain > unassessed)
• Amphiprora biseriata O'Meara, 1871 (uncertain > unassessed)
• Amphiprora brebissoniana Greville, 1863 (uncertain > unassessed)
• Amphiprora calumetica Thomas ex Wolle, 1890 (uncertain > unassessed)
• Amphiprora campechiana Grunow, 1880 (uncertain > unassessed)
• Amphiprora challengeri (Grunow in Cleve & Grunow) De Toni, 1891 accepted as Navicula challengeri Grunow, 1880
• Amphiprora challengeri Grunow in Cleve & Grunow, 1880 (uncertain > unassessed)
• Amphiprora chinensis Greville, 1865 (uncertain > unassessed)
• Amphiprora cholnokyi VanLandingham, 1967 accepted as Entomoneis costata (Hustedt) Reimer, 1975
• Amphiprora cholnokyi var. africana (Cholnoky) VanLandingham, 1967 accepted as Amphiprora hustedtii var. africana Cholnoky, 1960
• Amphiprora cholnokyi var. cholnokyi VanLandingham, 1967 (uncertain > unassessed)
• Amphiprora clepsydra Greville, 1863 (uncertain > unassessed)
• Amphiprora clepsydra Manguin in Bourrelly & Manguin, 1952 (uncertain > unassessed)
• Amphiprora clevei De Wildeman, 1899 (uncertain > unassessed)
• Amphiprora coarctata Brun in Brun & Tempère, 1889 (uncertain > unassessed)
• Amphiprora complexa Gregory, 1857 (uncertain > unassessed)
• Amphiprora concilians Cleve, 1896 (uncertain > unassessed)
• Amphiprora conserta Lewis, 1862 (uncertain > unassessed)
• Amphiprora conspicua Greville, 1861 (uncertain > unassessed)
• Amphiprora constricta Ehrenberg, 1843 (uncertain > unassessed)
• Amphiprora constricta sensu W. Smith, 1853 (uncertain > unassessed)
• Amphiprora contortissima Mereschkowsky, 1903 (uncertain > unassessed)
• Amphiprora contracta H. Peragallo in Pelletan, 1889 (uncertain > unassessed)
• Amphiprora cornuta Chase in Walker & Chase, 1886 (uncertain > unassessed)
• Amphiprora corrugata Giffen, 1963 (uncertain > unassessed)
• Amphiprora costata Hustedt, 1930 accepted as Entomoneis costata (Hustedt) Reimer, 1975
• Amphiprora costata O'Meara, 1869 (uncertain > unassessed)
• Amphiprora crassopunctata ‘Missuna' VanLandingham, 1979 (uncertain > unassessed)
• Amphiprora crenulata Tempère in Cleve, 1891 (uncertain > unassessed)
• Amphiprora cruenta Arnoldi, 1922 (uncertain > unassessed)
• Amphiprora cryophila Cleve, 1883 (uncertain > unassessed)
• Amphiprora cymbiformis Eichwald, 1852 (uncertain > unassessed)
• Amphiprora decussata Grunow, 1877 (uncertain > unassessed)
• Amphiprora decussata var. decussata Grunow in Cleve & Grunow, 1880 (uncertain > unassessed)
• Amphiprora decussata var. gigantea (Grunow) H. Peragallo in H. Peragallo & M. Peragallo, 1898 accepted as Amphiprora gigantea var. gigantea Grunow, 1860
• Amphiprora decussata var. septentrionalis Grunow, 1880 (uncertain > unassessed)
• Amphiprora delicatula Greville, 1863 (uncertain > unassessed)
• Amphiprora dhulensis Sarode & Kamat, 1984
• Amphiprora diadema O'Meara, 1871 (uncertain > unassessed)
• Amphiprora didyma W.Smith, 1853 (uncertain > unassessed)
• Amphiprora dilatata Pantocsek, 1889 (uncertain > unassessed)
• Amphiprora duplex Donkin, 1858
• Amphiprora duplex var. duplex Donkin, 1858 (uncertain > unassessed)
• Amphiprora duplex var. hyalina ‘Eulenstein manuscript ex Grunow in Van Heurck' Mills, 1880 (uncertain > unassessed)
• Amphiprora dusenii Cleve, 1894 (uncertain > unassessed)
• Amphiprora elegans Bleakley in Gregory, 1855 (uncertain > unassessed)
• Amphiprora elegans W.Smith, 1856 accepted as Tropidoneis elegans (W.Smith) Cleve, 1894
• Amphiprora elegans var. adriatica Grunow in Cleve & Grunow, 1880 (uncertain > unassessed)
• Amphiprora elegans var. elegans W. Smith, 1856 (uncertain > unassessed)
• Amphiprora elegans var. gracilis Grunow in Cleve & Grunow, 1880 (uncertain > unassessed)
• Amphiprora elegans var. posewitzii Pantocsek, 1889 (uncertain > unassessed)
• Amphiprora elongata ‘Brébisson' Chase (uncertain > unassessed)
• Amphiprora eximia Greville, 1863 (uncertain > unassessed)
• Amphiprora fimbriata Castracane, 1886 (uncertain > unassessed)
• Amphiprora formosa Meunier, 1910 (uncertain > unassessed)
• Amphiprora fragilis Tempère & Brun in Brun & Tempère, 1889 (uncertain > unassessed)
• Amphiprora frigida Petit, 1908 (uncertain > unassessed)
• Amphiprora fulva Donkin, 1858 (uncertain > unassessed)
• Amphiprora galerita Giffen, 1967 (uncertain > unassessed)
• Amphiprora gibberula ‘Grunow in Van Heurck' according to Mills (uncertain > unassessed)
• Amphiprora gibberula ‘Missuna' VanLandingham, 1979 (uncertain > unassessed)
• Amphiprora gigantea Grunow, 1860
• Amphiprora gigantea f. minor Miller, 1964 (uncertain > unassessed)
• Amphiprora gigantea subsp. septentrionalis Grun. In Cleve & Grun., 1880 accepted as Amphiprora decussata var. septentrionalis Grunow, 1880
• Amphiprora gigantea var. aequatorialis (Cleve) Cleve, 1894 accepted as Amphicampa aequatorialis Cleve, 1873
• Amphiprora gigantea var. decussata (Grunow in Cleve & Grunow) Cleve, 1894 accepted as Amphiprora decussata var. decussata Grunow in Cleve & Grunow, 1880
• Amphiprora gigantea var. gigantea Grunow, 1860 (uncertain > unassessed)
• Amphiprora gigantea var. kerguelensis Grunow in Cleve & Grunow, 1880 (uncertain > unassessed)
• Amphiprora gigantea var. septentrionalis (Grunow) Cleve, 1894 accepted as Amphiprora decussata var. septentrionalis Grunow, 1880