• Aiolochroia crassa (Hyatt, 1875)
• Aiolochroia ianthella (de Laubenfels, 1949) accepted as Aiolochroia crassa (Hyatt, 1875)
• Aiolochroia janusi (Boury-Esnault, 1973)
• Aiolochroia thiona (Laubenfels, 1930)
• Anomoianthella lamella Pulitzer-Finali & Pronzato, 1999
• Anomoianthella popeae Bergquist, 1980
• Anomoianthella rubra Bergquist, 1995
• Aplysia aerophoba Nardo, 1833 accepted as Aplysina aerophoba (Nardo, 1833)
• Aplysina aerophoba (Nardo, 1833)
• Aplysina aggregata Topsent, 1932 accepted as Aplysina fistularis (Pallas, 1766)
• Aplysina airapii Gómez, González-Acosta, Sánchez-Ortíz, Hoffman & Hernández-Guerrero, 2018
• Aplysina alcicornis Pinheiro, Hajdu & Custódio, 2007
• Aplysina anomala Wilson, 1902 accepted as Aplysina insularis (Duchassaing & Michelotti, 1864)
• Aplysina applicata (Duchassaing & Michelotti, 1864) (uncertain > taxon inquirendum)
• Aplysina archeri (Higgin, 1875)
• Aplysina aurea Gammill, 1997 (uncertain > taxon inquirendum)
• Aplysina aurea Hyatt, 1875 accepted as Smenospongia aurea (Hyatt, 1875)
• Aplysina azteca Gómez & Bakus, 1992
• Aplysina bathyphila Maldonado & Young, 1998
• Aplysina cacos Lendenfeld, 1888
• Aplysina caespitosa Carter, 1886 accepted as Dictyodendrilla caespitosa (Carter, 1886)
• Aplysina caissara Pinheiro & Hajdu, 2001
• Aplysina cancellata (Linnaeus, 1767) accepted as Aplysina fulva (Pallas, 1766)
• Aplysina capensis Carter, 1875
• Aplysina carnosa Schmidt, 1862 accepted as Aplysina aerophoba (Nardo, 1833)
• Aplysina cauliformis (Carter, 1882)
• Aplysina cauliformis sensu Carter, 1882 accepted as Callyspongia (Cladochalina) tenerrima Duchassaing & Michelotti, 1864
• Aplysina cavernicola (Vacelet, 1959)
• Aplysina cellulosa Hyatt, 1875
• Aplysina chalinoides Carter, 1875 accepted as Haliclona chalinoides (Carter, 1875)
• Aplysina chiriquiensis Díaz, van Soest, Rützler & Guzman, 2005
• Aplysina clathrata Cruz-Barraza, Carballo, Rocha-Olivares, Ehrlich & Hog, 2012
• Aplysina compacta Carter, 1881
• Aplysina compressa Carter, 1882 accepted as Verongula gigantea (Hyatt, 1875)
• Aplysina corneostellata Carter, 1872 accepted as Darwinella corneostellata (Carter, 1872)
• Aplysina crassa (Hyatt, 1877) accepted as Aiolochroia crassa (Hyatt, 1875)
• Aplysina cristagallus Pinheiro, Hajdu & Custódio, 2007
• Aplysina cruor Carter, 1886 accepted as Dendrilla cruor (Carter, 1886)
• Aplysina ecuatorensis Desqueyroux-Faúndez & van Soest, 1997 accepted as Aplysina chiriquiensis Díaz, van Soest, Rützler & Guzman, 2005
• Aplysina elegans (Lendenfeld, 1888) accepted as Suberea elegans (Lendenfeld, 1888)
• Aplysina encarnacionae Gómez, González-Acosta, Sánchez-Ortíz, Hoffman & Hernández-Guerrero, 2018
• Aplysina euplectella (Hentschel, 1912) accepted as Fasciospongia euplectella (Hentschel, 1912)
• Aplysina fenestrata (Duchassaing & Michelotti, 1864) accepted as Smenospongia musicalis (Duchassaing & Michelotti, 1864)
• Aplysina fistularis (Pallas, 1766)
• Aplysina fistularis f. ansa (Laubenfels, 1950) accepted as Aplysina insularis (Duchassaing & Michelotti, 1864)
• Aplysina fistularis f. fistularis Wiedenmayer, 1977 accepted as Aplysina fistularis (Pallas, 1766)
• Aplysina fistularis f. fulva (Pallas, 1766) accepted as Aplysina fulva (Pallas, 1766)
• Aplysina fistularis f. insularis (Duchassaing & Michelotti, 1864) represented as Aplysina insularis (Duchassaing & Michelotti, 1864)
• Aplysina fistularis var. aggregata Topsent, 1932 accepted as Aplysina fistularis (Pallas, 1766)
• Aplysina flagelliformis (Carter, 1886) (uncertain > taxon inquirendum)
• Aplysina flagelliformis var. anomala Wilson, 1902 accepted as Aplysina insularis (Duchassaing & Michelotti, 1864)
• Aplysina flagelliformis var. rugosa Wilson, 1902 accepted as Aplysina fulva (Pallas, 1766)
• Aplysina fragilis Wilson, 1902 accepted as Aplysina fulva (Pallas, 1766)
• Aplysina fulva (Pallas, 1766)
• Aplysina fusca Carter, 1880 accepted as Suberea fusca (Carter, 1880)
• Aplysina gerardogreeni Gómez & Bakus, 1992
• Aplysina gigantea Hyatt, 1875 accepted as Verongula gigantea (Hyatt, 1875)
• Aplysina grisea Lendenfeld, 1889 accepted as Dictyodendrilla caespitosa (Carter, 1886)
• Aplysina herdmani Dendy, 1905 accepted as Luffariella herdmani (Dendy, 1905)
• Aplysina higginsii Lendenfeld, 1889
• Aplysina hirsuta (Hyatt, 1875)
• Aplysina hirsuta var. fistularoides (Hyatt, 1875)
• Aplysina hirsuta var. fulvoides (Hyatt, 1875)
• Aplysina holda Lendenfeld, 1889
• Aplysina ianthelliformis (Lendenfeld, 1888) accepted as Suberea ianthelliformis (Lendenfeld, 1888)
• Aplysina incrustans Carter, 1876 accepted as Chelonaplysilla incrustans (Carter, 1876)
• Aplysina inflata Carter, 1881
• Aplysina insularis (Duchassaing & Michelotti, 1864)
• Aplysina janusi (Boury-Esnault, 1973) accepted as Aiolochroia janusi (Boury-Esnault, 1973)
• Aplysina lactuca Pinheiro, Hajdu & Custódio, 2007
• Aplysina lacunosa (Lamarck, 1814)
• Aplysina laevis Carter, 1885 accepted as Pseudoceratina durissima Carter, 1885
• Aplysina lendenfeldi Bergquist, 1980
• Aplysina lingua Pinheiro, Hajdu & Custódio, 2007
• Aplysina longissima Carter, 1882 accepted as Callyspongia (Cladochalina) tenerrima Duchassaing & Michelotti, 1864
• Aplysina massa (Szymanski, 1904) accepted as Cacospongia mollior Schmidt, 1862
• Aplysina massa Carter, 1886 accepted as Dictyodendrilla massa (Carter, 1886)
• Aplysina meandrina Lendenfeld, 1889
• Aplysina membranosa (Pallas, 1766) accepted as Dendrilla membranosa (Pallas, 1766)
• Aplysina minima Hentschel, 1914
• Aplysina minuta Lendenfeld, 1889
• Aplysina mollis Row, 1911 accepted as Suberea mollis (Row, 1911)
• Aplysina mollis var. aruensis Hentschel, 1912 accepted as Suberea mollis var. aruensis (Hentschel, 1912)
• Aplysina muricyana Pinheiro, Hajdu & Custódio, 2007
• Aplysina noevus Carter, 1876 accepted as Chelonaplysilla noevus (Carter, 1876)
• Aplysina nuciformis (Duchassaing & Michelotti, 1864) accepted as Aplysina lacunosa (Lamarck, 1814)
• Aplysina ocracea Alcolado, 1984
• Aplysina orthoreticulata Pinheiro, Hajdu & Custódio, 2007
• Aplysina pallasi Ridley, 1884 accepted as Dictyodendrilla pallasi (Ridley, 1884)
• Aplysina pedicellata Hyatt, 1878 (uncertain > taxon inquirendum)
• Aplysina pergamentacea Hechtel, 1983
• Aplysina picea (Duchassaing & Michelotti, 1864) (uncertain > taxon inquirendum)
• Aplysina praetensa Row, 1911 accepted as Suberea praetensa (Row, 1911)
• Aplysina praetexta Hyatt, 1875 accepted as Verongula gigantea (Hyatt, 1875)
• Aplysina primitiva Burton, 1959
• Aplysina procumbens Lendenfeld, 1889
• Aplysina pseudolacunosa Pinheiro, Hajdu & Custódio, 2007
• Aplysina purpurea Carter, 1880 accepted as Pseudoceratina purpurea (Carter, 1880)
• Aplysina ramosa Lendenfeld, 1889 accepted as Lendenfeldia ramosa (Lendenfeld, 1889)
• Aplysina regularis Ridley, 1881 accepted as Spongionella regularis (Ridley, 1881)