• Pomacentrus Lacepède, 1802
• Pomacentrus acapulcoensis Fowler, 1944 accepted as Stegastes acapulcoensis (Fowler, 1944)
• Pomacentrus adelus Allen, 1991
• Pomacentrus adustus Troschel, 1865 accepted as Stegastes adustus (Troschel, 1865)
• Pomacentrus agassizi Bliss, 1883 accepted as Pomacentrus agassizii Bliss, 1883
• Pomacentrus agassizii Bliss, 1883
• Pomacentrus albiaxillaris Allen, Erdmann & Pertiwi, 2017
• Pomacentrus albicaudatus Baschieri-Salvadori, 1955
• Pomacentrus albifasciatus Schlegel & Müller, 1839 accepted as Stegastes albifasciatus (Schlegel & Müller, 1839)
• Pomacentrus albimaculatus Allen, 1975 accepted as Pomacentrus albimaculus Allen, 1975
• Pomacentrus albimaculus Allen, 1975
• Pomacentrus albofasciatus Schlegel & Müller, 1839 accepted as Stegastes albifasciatus (Schlegel & Müller, 1839)
• Pomacentrus alexanderae Evermann & Seale, 1907
• Pomacentrus alleni Burgess, 1981
• Pomacentrus altus Okada & Ikeda, 1937 accepted as Plectroglyphidodon altus (Okada & Ikeda, 1937)
• Pomacentrus amboiensis Bleeker, 1868 accepted as Pomacentrus amboinensis Bleeker, 1868
• Pomacentrus amboinensis Bleeker, 1868
• Pomacentrus anabatoids (Bleeker, 1847) accepted as Neopomacentrus anabatoides (Bleeker, 1847)
• Pomacentrus analigutta Gill, 1862 accepted as Stegastes rectifraenum (Gill, 1862)
• Pomacentrus analis Poey, 1868 accepted as Stegastes leucostictus (Müller & Troschel, 1848)
• Pomacentrus andamanensis Allen, Erdmann & Ningsih, 2020
• Pomacentrus annulatus Peters, 1855 accepted as Chrysiptera annulata (Peters, 1855)
• Pomacentrus apicalis De Vis, 1885 accepted as Plectroglyphidodon apicalis (De Vis, 1885)
• Pomacentrus aquilus Allen & Randall, 1981
• Pomacentrus arabicus Allen, 1991
• Pomacentrus arcifrons Heller & Snodgrass, 1903 accepted as Stegastes arcifrons (Heller & Snodgrass, 1903)
• Pomacentrus arenarius Allen, 1987 accepted as Pomacentrus nagasakiensis Tanaka, 1917
• Pomacentrus armillatus Allen, 1993
• Pomacentrus ater Bleeker, 1879 accepted as Stegastes limbatus (Cuvier, 1830)
• Pomacentrus ater Liénard, 1891 accepted as Stegastes limbatus (Cuvier, 1830)
• Pomacentrus atriaxillaris Allen, 2002
• Pomacentrus atrilabiatus Fowler, 1946 accepted as Plectroglyphidodon fasciolatus (Ogilby, 1889)
• Pomacentrus atrocyaneus Poey, 1860 accepted as Stegastes leucostictus (Müller & Troschel, 1848)
• Pomacentrus aureus Fowler, 1927 accepted as Plectroglyphidodon aureus (Fowler, 1927)
• Pomacentrus aurifrons Allen, 2004
• Pomacentrus auriventris Allen, 1991
• Pomacentrus auriventrus Allen, 1991 accepted as Pomacentrus auriventris Allen, 1991
• Pomacentrus australis Allen & Robertson, 1974
• Pomacentrus azuremaculatus Allen, 1991
• Pomacentrus azureomaculatus Allen, 1991 accepted as Pomacentrus azuremaculatus Allen, 1991
• Pomacentrus azysron Bleeker, 1877 accepted as Neopomacentrus azysron (Bleeker, 1877)
• Pomacentrus baenschi Allen, 1991
• Pomacentrus bairdii Gill, 1862 accepted as Microspathodon bairdii (Gill, 1862)
• Pomacentrus bangladeshius Habib, Islam, Nahar & Neogi, 2020
• Pomacentrus bankanensis Bleeker, 1854
• Pomacentrus beauforti Fowler & Bean, 1928 accepted as Amblypomacentrus breviceps (Schlegel & Müller, 1839)
• Pomacentrus beebei (Nichols, 1924) accepted as Stegastes beebei (Nichols, 1924)
• Pomacentrus bellipictus Allen, Erdmann & Hidayat, 2018
• Pomacentrus bifasciatus Bleeker, 1854 accepted as Dischistodus perspicillatus (Cuvier, 1830)
• Pomacentrus bilineatus Castelnau, 1873 accepted as Pomacentrus tripunctatus Cuvier, 1830
• Pomacentrus bintanensis Allen, 1999
• Pomacentrus biocellatus Rüppell, 1838 accepted as Pomacentrus trilineatus Cuvier, 1830
• Pomacentrus bipunctatus Allen & Randall, 2004
• Pomacentrus boroughi Fowler, 1918 accepted as Pomacentrus burroughi Fowler, 1918
• Pomacentrus brachialis Cuvier, 1830
• Pomacentrus breviceps (Schlegel & Müller, 1839) accepted as Amblypomacentrus breviceps (Schlegel & Müller, 1839)
• Pomacentrus burdi Lacepède, 1802 accepted as Cephalopholis miniata (Forsskål, 1775)
• Pomacentrus burroughi Fowler, 1918
• Pomacentrus caeruleopunctatus Allen, 2002
• Pomacentrus caeruleus Quoy & Gaimard, 1825
• Pomacentrus callainus Randall, 2002
• Pomacentrus catunco Peters, 1868 accepted as Pomacentrus tripunctatus Cuvier, 1830
• Pomacentrus caudalis Poey, 1868 accepted as Stegastes leucostictus (Müller & Troschel, 1848)
• Pomacentrus caudovittatus Schmidt, 1931 accepted as Pomacentrus pavo (Bloch, 1787)
• Pomacentrus cheraphilus Allen, Erdmann & Hilomen, 2011
• Pomacentrus chrysopoecilus Schlegel & Müller, 1839 accepted as Dischistodus chrysopoecilus (Schlegel & Müller, 1839)
• Pomacentrus chrysurus Cuvier, 1830
• Pomacentrus coelestis Jordan & Starks, 1901
• Pomacentrus coelistis Jordan & Starks, 1901 accepted as Pomacentrus coelestis Jordan & Starks, 1901
• Pomacentrus coeruleus Quoy & Gaimard, 1825 accepted as Pomacentrus caeruleus Quoy & Gaimard, 1825
• Pomacentrus colini Allen, 1991
• Pomacentrus cranei Herre, 1935 accepted as Pomacentrus burroughi Fowler, 1918
• Pomacentrus craticulus Smith, 1965 accepted as Plectroglyphidodon fasciolatus (Ogilby, 1889)
• Pomacentrus cuadalis Poey, 1868 accepted as Stegastes leucostictus (Müller & Troschel, 1848)
• Pomacentrus cuneatus Allen, 1991
• Pomacentrus cyanomos Bleeker, 1856 accepted as Neopomacentrus cyanomos (Bleeker, 1856)
• Pomacentrus cyanospilos Bleeker, 1853 accepted as Stegastes punctatus (Quoy & Gaimard, 1825)
• Pomacentrus cyanospilus Bleeker, 1853 accepted as Stegastes punctatus (Quoy & Gaimard, 1825)
• Pomacentrus cyanostigma Klunziger, 1871 accepted as Pristotis cyanostigma Rüppell, 1838
• Pomacentrus darwiniensis Whitley, 1928 accepted as Dischistodus darwiniensis (Whitley, 1928)
• Pomacentrus delurus Jordan & Seale, 1905 accepted as Pomacentrus bankanensis Bleeker, 1854
• Pomacentrus denegatus Poey, 1860 accepted as Microspathodon chrysurus (Cuvier, 1830)
• Pomacentrus devisi Jordan & Seale, 1906 accepted as Dascyllus aruanus (Linnaeus, 1758)
• Pomacentrus diencaeus (Jordan & Rutter, 1897) accepted as Stegastes diencaeus (Jordan & Rutter, 1897)
• Pomacentrus dimidiatus Bleeker, 1876 accepted as Pomacentrus amboinensis Bleeker, 1868
• Pomacentrus dolii MacLeay, 1881 accepted as Pristotis obtusirostris (Günther, 1862)
• Pomacentrus dorsalis Gill, 1859 accepted as Pomacentrus bankanensis Bleeker, 1854
• Pomacentrus dorsomaculatus Kendall & Goldsborough, 1911 accepted as Dischistodus perspicillatus (Cuvier, 1830)
• Pomacentrus dorsopunicans Poey, 1868 accepted as Stegastes adustus (Troschel, 1865)
• Pomacentrus eclipticus Jordan & Seale, 1906 accepted as Stegastes albifasciatus (Schlegel & Müller, 1839)
• Pomacentrus elaimelas Fowler, 1944 accepted as Stegastes leucorus (Gilbert, 1892)
• Pomacentrus elongatus Seale, 1910 accepted as Pomacentrus tripunctatus Cuvier, 1830
• Pomacentrus emamo Lesson, 1831 accepted as Dascyllus aruanus (Linnaeus, 1758)
• Pomacentrus emarginatus Cuvier, 1829
• Pomacentrus enneodactylus Lacepède, 1802 accepted as Scolopsis vosmeri (Bloch, 1792)
• Pomacentrus exilis Allen & Emery, 1973 accepted as Pomachromis exilis (Allen & Emery, 1973)
• Pomacentrus fakfakensis Allen & Erdmann, 2009
• Pomacentrus fasciatus Cuvier, 1830 accepted as Dischistodus fasciatus (Cuvier, 1830)
• Pomacentrus fasciatus intermedia Weber, 1913 accepted as Dischistodus chrysopoecilus (Schlegel & Müller, 1839)
• Pomacentrus fasciolatus Ogilby, 1889 accepted as Plectroglyphidodon fasciolatus (Ogilby, 1889)